BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005C07SP1|AL425352
(992 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1794 1643 0.0
>3x_Contig1794
Length = 36744
Score = 1643 bits (816), Expect = 0.0
Identities = 948/992 (95%), Gaps = 14/992 (1%)
Strand = Plus / Plus
Query: 1 ttacgtatgtacagaracgctcaaagggaagaagctgcgtctagttcccaacgacgtgac 60
|||||||||| |||| |||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 27873 ttacgtatgttcagagacgctcaaagggaaga-gctgcgtctagttcc-aacgacgtgac 27930
Query: 61 amaraatcaagccctccagtagggtcaccggaatctgaccccggttctaataggtcacaa 120
| | ||||| |||||||||||||||| |||||||||| ||||| ||| ||| |||||
Sbjct: 27931 acagaatcag--cctccagtagggtcac-ggaatctgac-ccggt-cta-tag-tcacac 27983
Query: 121 caattatcgaattcttcctcatctgctcataatattcttttcgaaccgttggcaaagcct 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27984 --attatcgaattct-cctcatctgctcataatattcttttcgaaccgttggcaaagcct 28040
Query: 181 ggcgctgatgtcaccaacctttacaattccaccgaggaaaatcttttcccgaatttgtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28041 ggcgctgatgtcaccaacctttacaattccaccgaggaaaatcttttcccgaatttgtta 28100
Query: 241 gtatcttatccgagctccaacgattccatcctgctttgccatgtcggtggccttcgtaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28101 gtatcttatccgagctccaacgattccatcctgctttgccatgtcggtggccttcgtaat 28160
Query: 301 catatatctactgamaccatcgaatatactgatattaaarctgtattaaacggatgcgaa 360
|||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 28161 catatatctactgacaccatcgaatatactgatattaaagctgtattaaacggatgcgaa 28220
Query: 361 ccatcgttgatgccagtatctaamaractaaacgaattttgtcgcgattggtgttactca 420
||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||
Sbjct: 28221 ccatcgttgatgccagtatctaacagactagacgaattttgtcgcgattggtgttactca 28280
Query: 421 cataacctcaagaccacagatctcgtmatcaaatgcagaagaagcagatttattattagt 480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 28281 cataacctcaagaccacagatctcgtcatcaaatgcagaagaagcagatttattattagt 28340
Query: 481 cattcatcgattgaaactaacaacgactatctgatttgcattgacgacaatatcgagata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28341 cattcatcgattgaaactaacaacgactatctgatttgcattgacgacaatatcgagata 28400
Query: 541 aacgataacaaacttccatttgcagtactagaagtgaaaattctcgaagcaacttcatcg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28401 aacgataacaaacttccatttgcagtactagaagtgaaaattctcgaagcaacttcatcg 28460
Query: 601 tcgtctgtaccaaataagacctattccaaraaacacattgatccaataatggtagatctt 660
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 28461 tcgtctgtaccaaataagacctattccaagaaacacattgatccaataatggtagatctt 28520
Query: 661 acggagaaactagtaacggawaacctttccgtttaccctacaggtaggaattttactctt 720
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 28521 acggagaaactagtaacggataacctttccgtttaccctacaggtaggaattttactctt 28580
Query: 721 tgggaaatggctggaaaaatagcaggaggtagcaatccacttgcatgtctcgatgggaa- 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28581 tgggaaatggctggaaaaatagcaggaggtagcaatccacttgcatgtctcgatgggaac 28640
Query: 780 ctcaattttgagtccgtagaagagatgttcggagctggtaacgctcttttgaagaagact 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28641 ctcaattttgagtccgtagaagagatgttcggagctggtaacgctcttttgaagaagact 28700
Query: 840 cacgamaggwatmaatcactgctaaacccmcctacaawagagttttcccmgtvatcatcm 899
||||| ||| || |||||||||||||||| ||||||| ||| ||||||| || ||||||
Sbjct: 28701 cacgacaggtatcaatcactgctaaacccacctacaatagaattttcccagtcatcatcc 28760
Query: 900 caaaamacagcsgtgaatatstcavctactggtaaaagaacgtgaaaggcctagaattcg 959
||||| ||||| |||||||| ||| ||||| |||| ||||||||||| ||||||||||||
Sbjct: 28761 caaaacacagccgtgaatatctcacctact-gtaacagaacgtgaaaagcctagaattcg 28819
Query: 960 ttamtggaatgaatttgatgacggagaagagg 991
||| ||||||||||||||||||||||||||||
Sbjct: 28820 ttactggaatgaatttgatgacggagaagagg 28851
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5365
Number of Sequences: 1807
Number of extensions: 5365
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 992
length of database: 10,358,551
effective HSP length: 16
effective length of query: 976
effective length of database: 10,329,639
effective search space: 10081727664
effective search space used: 10081727664
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)